bactopia-review-tests

Review nf-test results with grouped error analysis and timing checks.

Analyzes test run logs, classifies failures by error pattern, and optionally checks durations against expected baselines.

Usage

bactopia-review-tests [OPTIONS]

Required Options

Option	Type	Default	Description
--bactopia-path	STRING	-	Directory where Bactopia repository is stored

Run Selection

Option	Type	Default	Description
--run	STRING	-	Specific test run timestamp (YYYYMMDD_HHMMSS). Default: latest
--logs-dir	STRING	-	Directory containing test run logs. Default: {bactopia-path}/logs/run-tests

Timing Options

Option	Type	Default	Description
--baselines	STRING	-	Path to test-times baseline JSON file. Default: {bactopia-path}/conf/test-times.json
--tolerance	FLOAT	2.0	Tolerance factor for timing anomaly detection
--update-baselines	BOOL	false	Write/update the baselines file from current run results

Output Options

Option	Type	Default	Description
--json	BOOL	false	Output as JSON
--pretty	BOOL	false	Pretty-print JSON output (implies --json)

Additional Options

Option	Type	Default	Description
--verbose	BOOL	false	Print debug related text
--silent	BOOL	false	Only critical errors will be printed
--version, -V	BOOL	false	Show the version and exit.